Genetic Resources


Cell Type-Specific Gene Expression Profiles in the Bladder

  • Part of the GUDMAP Project (www.gudmap.org)
  • Goal is to define molecular and cellular anatomy of the lower urinary tract through developmental time

 

Profiles of gene expression from Sall1 mutants

 

Genomic data

  • CNV calls for 21,565 controls as a reference for CNV lookups
  • Raw genotyping data for RIVUR study (fully QC’ed data coming soon)

 

Kidney Damage (“AKI”)

  • Comparing Ischemic Damage and Volume Depletion. A Map of Gene Expression in Cortex, Glomeruli, Outer and Inner Medulla.
    • Click here for Gene List #1 and Gene List #2 (gene lists open in separate window)
    • Lists show domain-specific gene expression in damaged kidneys. These genes are upregulated >2-fold and (p<0.00001).
    • All genes that are exclusive to condition (approximately 70% of all upregulated genes) are displayed.
  • Comparing Ischemic Damage and Volume Depletion. A map of  HoxB7-Cre (UB specific) and ATPase Cre (IC cell predominant) driven genes.

 

Kidney Infection, Cystitis and Pyelonephritis

  • A map of  HoxB7-Cre (UB specific) and ATPase Cre (IC cell predominant) driven genes in UTI.

 


For more information on these genetic resources, please contact us.